STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_001029Leucine-rich repeat-containing protein 71. (584 aa)    
Predicted Functional Partners:
TrispH2_004289
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.845
TrispH2_004085
Ubiquitin-40S ribosomal protein S27a.
    
  0.660
TrispH2_005360
Receptor-interacting serine/threonine-protein kinase 4.
   
 0.655
TrispH2_006308
Ubiquitin-60S ribosomal protein L40.
    
  0.651
TrispH2_001106
Protein SGT1-like protein A.
    
 0.620
TrispH2_000722
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.616
TrispH2_000241
AN1-type zinc finger protein 4.
    
 0.602
TrispH2_006305
Ubiquitin-60S ribosomal protein L40.
    
  0.600
TrispH2_003261
Baculoviral IAP repeat-containing protein 6.
    
 0.593
TrispH2_005590
Radial spoke head protein 4-like protein A.
   
 
 0.591
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.