STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_001120Protein unc-50-like protein. (207 aa)    
Predicted Functional Partners:
TrispH2_006695
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
    
 
 0.520
TrispH2_000161
Protein disulfide-isomerase TMX3.
      
 0.483
TrispH2_010303
Mannosyltransferase.
      
 0.477
TrispH2_000574
ADP-ribosylation factor-related protein 1.
    
 
 0.477
TrispH2_006142
A-kinase anchor protein 17A.
      
 0.474
TrispH2_001208
Rho GTPase-activating protein 6.
      
 0.468
TrispH2_010125
UDP-glucuronic acid decarboxylase 1.
      
 0.461
TrispH2_001564
Transmembrane protein with metallophosphoesterase domain.
      
 0.459
TrispH2_001929
Magnesium transporter NIPA2.
 
    
 0.425
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.