STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_001992Glutathione S-transferase theta-1; Belongs to the GST superfamily. (220 aa)    
Predicted Functional Partners:
TrispH2_004843
Bifunctional glutamate/proline--tRNA ligase.
   
 0.960
TrispH2_008568
Elongation factor 1-delta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.778
TrispH2_002934
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.778
TrispH2_007919
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.725
TrispH2_007923
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.725
TrispH2_006244
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
   
 0.725
TrispH2_001830
Tyrosine--tRNA ligase.
   
 0.705
TrispH2_007225
Elongation factor 1-gamma.
   
 0.675
TrispH2_009662
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.670
TrispH2_007223
Valine--tRNA ligase, mitochondrial 1; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.606
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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