STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_001589Transmembrane protein 231. (306 aa)    
Predicted Functional Partners:
TrispH2_009034
B9 domain-containing protein 2.
   
 
 0.853
TrispH2_008303
B9 domain-containing protein 1.
   
 
 0.826
TrispH2_009628
Transmembrane protein 17B.
    
 
 0.685
TrispH2_008639
Meckel syndrome type 1 protein.
    
 
 0.680
TrispH2_006490
Coiled-coil and C2 domain-containing protein 2A.
    
 
 0.678
TrispH2_001256
Nephrocystin-1.
   
  
 0.649
TrispH2_004752
Transmembrane protein 237.
      
 0.645
TrispH2_003796
Meckelin.
   
  
 0.635
TrispH2_002186
Transmembrane protein 216.
   
  
 0.622
TrispH2_005334
Protein fantom.
      
 0.599
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.