STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_000011Peroxisomal membrane protein 11C. (253 aa)    
Predicted Functional Partners:
TrispH2_006738
Peroxisomal biogenesis factor 19.
   
 0.961
TrispH2_008027
Peroxisomal membrane protein 11B.
    
 0.904
TrispH2_004525
Peroxisomal membrane protein PEX13.
   
 0.893
TrispH2_008800
Peroxisome assembly protein 12.
   
 0.853
TrispH2_008451
Peroxisomal membrane protein PEX14.
    
 0.848
TrispH2_001489
Peroxisomal biogenesis factor 3.
   
 0.837
TrispH2_003764
Protein FAM185A.
    
 0.785
TrispH2_003297
Peroxisome assembly factor 2.
    
 0.764
TrispH2_009966
Peroxisomal membrane protein PEX16.
   
 
 0.757
TrispH2_008514
Peroxisome biogenesis factor 2.
    
 0.716
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.