STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_000106ADP-ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family. (181 aa)    
Predicted Functional Partners:
TrispH2_001384
Cyclin-G-associated kinase.
    
 0.984
TrispH2_001081
Intersectin-2.
    
 0.936
TrispH2_004893
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.882
TrispH2_000730
AP-1 complex subunit gamma.
    
 0.870
TrispH2_006695
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
    
 0.869
TrispH2_004289
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.861
TrispH2_003316
AP complex subunit beta.
   
 0.853
TrispH2_001457
ADP-ribosylation factor GTPase-activating protein 1.
   
 0.852
TrispH2_001240
AP-4 complex subunit beta-1.
    
 0.816
TrispH2_008009
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.811
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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