STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_000035WD repeat-containing protein 82. (318 aa)    
Predicted Functional Partners:
TrispH2_009441
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.997
TrispH2_009315
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.995
TrispH2_008400
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.995
TrispH2_003348
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.995
TrispH2_002346
Cleavage and polyadenylation specificity factor subunit 4.
    
 0.995
TrispH2_005406
Pre-mRNA 3' end processing protein WDR33.
   
0.994
TrispH2_000340
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.994
TrispH2_005986
E3 ubiquitin-protein ligase RBBP6.
    
 0.992
TrispH2_002441
Symplekin.
   
 
 0.987
TrispH2_011464
Histone-lysine N-methyltransferase SETD1.
    
 
 0.975
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.