STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0102_0080Nop domain-containing protein. (484 aa)    
Predicted Functional Partners:
Esi_0199_0059
Similar to U3 small nucleolar RNA interacting protein 2.
   
 0.999
Esi_0333_0005
Nop domain-containing protein.
  
0.999
Esi_0047_0121
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
Esi_0135_0025
WD_REPEATS_REGION domain-containing protein.
   
 0.998
Esi_0029_0039
WD_REPEATS_REGION domain-containing protein.
   
 0.998
Esi_0344_0036
WD_REPEATS_REGION domain-containing protein.
   
 0.998
WD40-4
Conserved WD40 repeat-containing protein.
   
 0.998
Esi_0324_0024
Similar to WD repeat domain 36.
   
 0.997
Esi_0102_0055
Uncharacterized protein.
   
 0.996
Esi_0125_0072
BP28CT domain-containing protein.
   
 0.996
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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