STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0109_0038ATP-binding cassette transporter. (393 aa)    
Predicted Functional Partners:
Esi_0041_0160
ABC transporter ABCC.12.
 
0.949
Esi_0238_0009
Multidrug Resistance associated Protein 1.
 
 
 0.748
Esi_0125_0018
Uncharacterized protein.
    
 0.708
ACC
Acetyl-CoA carboxylase, partial.
   
 0.695
ACC-2
Acetyl-CoA carboxylase, partial.
   
 0.695
ACC-3
Acetyl-CoA carboxylase, partial.
   
 0.695
ACC-4
Acetyl-CoA carboxylase, partial.
   
 0.695
ACC-6
Acetyl-CoA carboxylase.
   
 0.695
Esi_0042_0047
ABC transmembrane type-1 domain-containing protein.
 
  
  0.660
Esi_0077_0063
Uncharacterized protein.
 
 
0.660
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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