STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0115_0039Putative phosphatidylinositol 3-kinase; Belongs to the PI3/PI4-kinase family. (1039 aa)    
Predicted Functional Partners:
Esi_0007_0111
Conserved protein.
   
 0.981
Esi_0154_0040
Uncharacterized protein.
    
 0.973
Esi_0110_0037
Beclin-1, putative.
    
 0.964
Atg6
Beclin.
    
 0.964
Esi_0146_0052
Protein kinase domain-containing protein.
    
 0.962
Esi_0192_0006
Protein kinase domain-containing protein.
    
 0.962
Esi_0081_0055
Uncharacterized protein.
    
 0.836
Rab5
Rab5, RAB family GTPase.
    
 0.826
Rab22
Rab22, RAB family GTPase.
    
 0.826
Rab50
Rab50, RAB family GTPase.
    
 0.826
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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