STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0120_0062WD_REPEATS_REGION domain-containing protein. (447 aa)    
Predicted Functional Partners:
Esi_0018_0042
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
  0.999
Esi_0183_0061
U3 snoRNP-associated protein Utp7.
   
 0.999
Esi_0021_0005
KH domain-containing protein.
   
 0.999
Esi_0218_0022
rRNA biogenesis protein rrp5.
   
  0.999
Esi_0265_0044
CBF domain-containing protein.
   
  0.999
Esi_0003_0239
Uncharacterized protein.
   
 0.999
Esi_0302_0026
Uncharacterized protein.
   
  0.999
Esi_0035_0030
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.999
Esi_0055_0017
Uncharacterized protein.
    
  0.999
Esi_0861_0003
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.999
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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