STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0127_0033Uncharacterized protein. (1729 aa)    
Predicted Functional Partners:
CPC12
AP-1 complex subunit gamma.
   
 
 0.583
CPC1
Coatomer protein complex, gamma sub-unit.
   
 
 0.583
CPC16
AP-1 complex subunit gamma; Belongs to the adaptor complexes large subunit family.
   
 
 0.583
CPC19
AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.
   
 
 0.462
CPC15
AP-1 complex subunit gamma; Belongs to the adaptor complexes large subunit family.
   
 
 0.445
APS1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
   0.412
APS3
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
   0.412
APM4
Clathrin assembly complex, medium subunit; Belongs to the adaptor complexes medium subunit family.
    
   0.410
Esi_0045_0029
Uncharacterized protein.
    
   0.410
CPC17
Coatomer protein complex, gamma sub-unit; Belongs to the adaptor complexes medium subunit family.
    
   0.410
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.