STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0134_0028TCTP domain-containing protein; Belongs to the TCTP family. (177 aa)    
Predicted Functional Partners:
EEF1Bbeta
Eukaryotic elongation factor-1 B beta.
  
 
 0.950
Esi_0100_0099
EF1_GNE domain-containing protein.
  
 
 0.945
Esi_0052_0041
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.938
Esi_0108_0022
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.927
Esi_0010_0136
Uncharacterized protein.
   
 
 0.924
Esi_0110_0002
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.923
Esi_0080_0071
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.922
Esi_0118_0023
Ribosomal_L14e domain-containing protein.
   
 
 0.920
Esi_0141_0063
Uncharacterized protein.
   
 
 0.919
Esi_0033_0018
Putative ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.918
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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