STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0134_0091Coronin; Belongs to the WD repeat coronin family. (969 aa)    
Predicted Functional Partners:
Esi_0361_0011
Uncharacterized protein.
  
 
 0.930
Esi_0036_0086
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
 0.876
Esi_0162_0042
GTP_CH_N domain-containing protein.
  
 0.792
Esi_0000_0446
GTP_cyclohydro2 domain-containing protein.
  
 0.792
Esi_0082_0032
GTP_cyclohydro2 domain-containing protein.
  
 0.792
Esi_0339_0028
GTP cyclohydrolase I.
    
 0.744
Esi_0349_0021
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
   
 0.743
Esi_0064_0067
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
   
 0.743
Esi_0315_0030
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
    
 0.715
Esi_0103_0061
Creatininase subfamily.
    
 0.709
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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