STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0135_0021TPR_REGION domain-containing protein. (893 aa)    
Predicted Functional Partners:
Esi_0118_0044
Uncharacterized protein.
    
 0.787
SNR6
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE), Vesicle-associated membrane protein; Belongs to the synaptobrevin family.
    
 0.773
SNR16
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE).
    
 0.772
SNR2
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE); Belongs to the synaptobrevin family.
    
  0.765
SNR4
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE); Belongs to the syntaxin family.
    
 0.756
Esi_0007_0128
Similar to suppressor of ypt1; Belongs to the STXBP/unc-18/SEC1 family.
    
  0.753
Esi_0054_0003
Uncharacterized protein.
    
  0.741
SNR8
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE).
   
 0.738
Esi_0029_0043
Uncharacterized protein.
    
 0.721
SNAPA1
Alpha-SNAP.
    
 0.721
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.