STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0140_0041Uncharacterized protein. (394 aa)    
Predicted Functional Partners:
Esi_0068_0071
UCH_1 domain-containing protein.
    
 0.592
Esi_0068_0072
Uncharacterized protein.
    
 0.592
Esi_0068_0074
F1E22.3.
    
 0.592
Esi_0211_0027
BZIP domain-containing protein.
    
  0.565
Esi_0127_0070
Uncharacterized protein.
    
  0.563
Esi_0115_0028
FHA domain-containing protein.
    
  0.560
GSKa
Glycogen synthase kinase-3 beta (GSK-3 beta); Belongs to the protein kinase superfamily.
   
  0.532
Esi_0431_0007
Uncharacterized protein.
     
 0.521
XylT
Beta-(1,2)-xylosyltransferase.
     
 0.521
rpl23
50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA.
    
 0.515
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.