Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Esi_0010_0137 | Esi_0031_0041 | D8LC27 | D8LKU3 | Uncharacterized protein. | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | 0.994 |
Esi_0010_0137 | Esi_0037_0010 | D8LC27 | D8LLJ7 | Uncharacterized protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.839 |
Esi_0010_0137 | Esi_0037_0013 | D8LC27 | D8LLJ8 | Uncharacterized protein. | Similar to splicing factor Prp8. | 0.988 |
Esi_0010_0137 | Esi_0047_0121 | D8LC27 | D7G2C5 | Uncharacterized protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.987 |
Esi_0010_0137 | Esi_0140_0087 | D8LC27 | D7FK64 | Uncharacterized protein. | Uncharacterized protein. | 0.992 |
Esi_0010_0137 | LSm2 | D8LC27 | D8LC63 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.989 |
Esi_0010_0137 | LSm3 | D8LC27 | D7FXS6 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.989 |
Esi_0010_0137 | Lsm8 | D8LC27 | D7FKG9 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.987 |
Esi_0010_0137 | SmE | D8LC27 | D8LD43 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.988 |
Esi_0010_0137 | Snu114 | D8LC27 | D8LIZ9 | Uncharacterized protein. | Snu114, GTPase of the U5 snRNP particle. | 0.988 |
Esi_0031_0041 | Esi_0010_0137 | D8LKU3 | D8LC27 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | Uncharacterized protein. | 0.994 |
Esi_0031_0041 | Esi_0037_0010 | D8LKU3 | D8LLJ7 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.987 |
Esi_0031_0041 | Esi_0037_0013 | D8LKU3 | D8LLJ8 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | Similar to splicing factor Prp8. | 0.988 |
Esi_0031_0041 | Esi_0047_0121 | D8LKU3 | D7G2C5 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.993 |
Esi_0031_0041 | Esi_0140_0087 | D8LKU3 | D7FK64 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | Uncharacterized protein. | 0.993 |
Esi_0031_0041 | LSm2 | D8LKU3 | D8LC63 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.991 |
Esi_0031_0041 | LSm3 | D8LKU3 | D7FXS6 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.988 |
Esi_0031_0041 | Lsm8 | D8LKU3 | D7FKG9 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.992 |
Esi_0031_0041 | SmE | D8LKU3 | D8LD43 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.991 |
Esi_0031_0041 | Snu114 | D8LKU3 | D8LIZ9 | Pre-mRNA processing ribonucleoprotein, binding region NOSIC. | Snu114, GTPase of the U5 snRNP particle. | 0.989 |
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