STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0150_0066DUF2012 domain-containing protein. (207 aa)    
Predicted Functional Partners:
Esi_0069_0022
Uncharacterized protein.
   
 
 0.981
Esi_0051_0045
ER membrane protein complex subunit 3.
   
 
 0.978
Esi_0094_0055
Uncharacterized protein.
    
 
 0.975
Esi_0130_0028
EMC1_C domain-containing protein.
    
 
 0.967
Esi_0024_0075
TPR_REGION domain-containing protein.
   
 
 0.967
Esi_0009_0053
Uncharacterized protein.
   
 
 0.966
Esi_0004_0061
COX4 neighbour.
    
 
 0.912
QCR-5
Ubiquinol cytochrome c reductase subunit QCR7.
   
 
  0.632
Esi_0161_0017
Uncharacterized protein.
   
 
  0.631
QCR-3
Ubiquinol cytochrome c reductase cytochrome c1 prec (ISS).
   
 
  0.624
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.