STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0156_0017SUDD-like protein. (768 aa)    
Predicted Functional Partners:
Esi_0000_0342
Uncharacterized protein; Belongs to the NOB1 family.
   
 0.981
Esi_0036_0088
Uncharacterized protein.
   
 0.965
Esi_0073_0071
KH type-2 domain-containing protein.
   
 0.961
Esi_0033_0018
Putative ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.958
Esi_0114_0059
KH domain-containing protein.
   
 0.955
Esi_0035_0030
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.938
Esi_0144_0039
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.924
SKB1
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 
 0.919
Esi_0055_0017
Uncharacterized protein.
    
  0.917
Esi_0090_0028
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
    
  0.916
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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