STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0016_0160annotation not available (265 aa)    
Predicted Functional Partners:
Esi_0260_0031
RNP-1 like RNA-binding protein.
  
 0.991
Esi_0003_0021
SAP domain-containing protein.
   
 0.990
Esi_0028_0166
PWI domain-containing protein.
   
 0.989
Esi_0162_0016
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.983
Esi_0073_0086
RanBD1 domain-containing protein.
   
  0.982
Esi_0013_0208
Putative hUPF2.
    
 0.981
Esi_0189_0043
RNA-binding protein, putative.
  
 
 0.978
Esi_0103_0065
Uncharacterized protein.
    
 0.975
Esi_0143_0003
Uncharacterized protein.
   
 0.974
Esi_0638_0002
Similar to arginine/serine-rich splicing factor 7.
  
 0.947
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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