STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0169_0052Transient receptor potential channel. (1047 aa)    
Predicted Functional Partners:
Esi_0058_0099
Protein kinase C, beta 1, like.
    
  0.543
Esi_0010_0023
Periplasmic binding protein.
    
  0.543
TIC
CHloroplast inner membrane protein TIC 21.
    
  0.524
Esi_0051_0120
Uncharacterized protein.
    
  0.524
Esi_0156_0060
Ankyrin Repeat Transient Receptor Potential Channel.
     
0.508
Esi_0211_0032
Transient Receptor Potential Channel.
     
0.508
Esi_0226_0014
Beta-galactosidase, family GH2; Belongs to the glycosyl hydrolase 2 family.
     
 0.508
Esi_0309_0034
Beta-galactosidase, family GH2.
     
 0.508
Esi_0019_0113
Ankyrin Repeat Transient Receptor Potential Channel.
     
0.508
Esi_0020_0081
Ankyrin Repeat Transient Receptor Potential Channel.
     
0.508
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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