STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0017_0024UDENN domain-containing protein. (1263 aa)    
Predicted Functional Partners:
Esi_0211_0027
BZIP domain-containing protein.
     
 0.524
Rab8D
Rab8D, RAB family GTPase.
    
 0.504
Rab8B
Rab8B, RAB family GTPase.
    
 0.504
Rab8C
Rab8C, RAB family GTPase.
    
 0.504
Rab8A
Rab8A, RAB family GTPase.
    
 0.504
Rab28
Rab28, Ras superfamily GTPase.
    
 0.504
RabX1
Divergent RAB-like GTPase.
    
 0.504
Rab8E
Rab8E, RAB family GTPase.
    
 0.504
Esi_0133_0051
Uncharacterized protein.
    
   0.405
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.