STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0172_0012Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
Esi_0413_0012
Nucleoporin_N domain-containing protein.
     
 0.743
Esi_0144_0001
RRM Nup35-type domain-containing protein.
     
 0.726
Hsp-3
Heat shock protein 70.
   
 0.724
Hsp-18
Weakly similar to heat shock protein 70.
   
 0.724
Hsp-20
Heat shock protein 70.
   
 0.724
Esi_0015_0081
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
     
 0.715
Esi_0073_0086
RanBD1 domain-containing protein.
   
 
  0.708
Esi_0102_0031
Uncharacterized protein.
    
  0.687
Esi_0219_0026
Nsp1_C domain-containing protein.
    
  0.687
Esi_0241_0035
WD_REPEATS_REGION domain-containing protein.
   
 
  0.676
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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