STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0172_0022Aminotransferase. (445 aa)    
Predicted Functional Partners:
Esi_0000_0340
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.826
Esi_0036_0051
Tryptophan synthase (Alpha / beta chains).
    
  0.765
Esi_0060_0108
Tryptophan synthase (Alpha / beta chains).
    
  0.765
GCL
Glutamate cysteine ligase.
    
 0.716
GCL-2
Glutamate cysteine ligase.
    
 0.716
GCL-3
Glutamate cysteine ligase.
    
 0.716
Esi_0085_0112
Aldo/keto reductase.
  
 0.699
Esi_0108_0106
Aldo_ket_red domain-containing protein.
  
 0.664
Esi_0159_0029
Aldo_ket_red domain-containing protein.
  
 0.664
Esi_0257_0008
Aldo/keto reductase.
  
 0.664
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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