STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0175_0015Uncharacterized protein. (194 aa)    
Predicted Functional Partners:
Esi_0126_0080
Uncharacterized protein.
   
 0.996
Esi_0489_0018
SWIB domain-containing protein.
   
 0.982
Esi_0268_0021
Uncharacterized protein.
   
 0.976
Esi_0196_0022
Protein binding protein, putative; Belongs to the actin family.
   
 0.975
Esi_0196_0027
Uncharacterized protein.
   
 0.975
Esi_0022_0135
Uncharacterized protein; Belongs to the actin family.
   
 0.975
Esi_0049_0105
JAB_MPN domain-containing protein.
   
 0.973
Esi_0041_0061
Phasmid Socket Absent family member (Psa-1).
   
 0.972
Esi_0041_0062
Internalin protein.
   
 0.972
Esi_0057_0057
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.914
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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