Esi_0179_0015 protein (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Esi_0179_0015

Enoyl-ACP reductase enoyl-ACP reductase. (366 aa)

Predicted Functional Partners:

Esi_0043_0063

0.805

Esi_0000_0340

0.796

Esi_0115_0055

0.725

Nia

0.725

NUOI

0.721

Esi_0309_0028

0.716

Esi_0335_0032

0.714

KAS

0.714

KAS-2

0.714

KAS-3

0.714

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Esi_0000_0340	Esi_0043_0063	D8LBA4	D8LN46	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Malonyl-CoA:ACP transacylase.	0.569
Esi_0000_0340	Esi_0115_0055	D8LBA4	D7FHZ6	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Cytochrome b5 heme-binding domain-containing protein.	0.528
Esi_0000_0340	Esi_0179_0015	D8LBA4	D7FNC8	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Enoyl-ACP reductase enoyl-ACP reductase.	0.796
Esi_0000_0340	Nia	D8LBA4	D8LQI2	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	NAD(P)H-Nitrate reductase.	0.528
Esi_0043_0063	Esi_0000_0340	D8LN46	D8LBA4	Malonyl-CoA:ACP transacylase.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.569
Esi_0043_0063	Esi_0179_0015	D8LN46	D7FNC8	Malonyl-CoA:ACP transacylase.	Enoyl-ACP reductase enoyl-ACP reductase.	0.805
Esi_0043_0063	Esi_0309_0028	D8LN46	D7FWP0	Malonyl-CoA:ACP transacylase.	Beta-hydroxyacyl-ACP dehydratase.	0.982
Esi_0043_0063	Esi_0335_0032	D8LN46	D7FXY2	Malonyl-CoA:ACP transacylase.	Ketoacyl_synth_N domain-containing protein.	0.943
Esi_0043_0063	KAS	D8LN46	D8LBL8	Malonyl-CoA:ACP transacylase.	Beta-ketoacyl synthase, partial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.969
Esi_0043_0063	KAS-2	D8LN46	D8LLC3	Malonyl-CoA:ACP transacylase.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.965
Esi_0043_0063	KAS-3	D8LN46	D8LRQ2	Malonyl-CoA:ACP transacylase.	Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.968
Esi_0115_0055	Esi_0000_0340	D7FHZ6	D8LBA4	Cytochrome b5 heme-binding domain-containing protein.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.528
Esi_0115_0055	Esi_0179_0015	D7FHZ6	D7FNC8	Cytochrome b5 heme-binding domain-containing protein.	Enoyl-ACP reductase enoyl-ACP reductase.	0.725
Esi_0115_0055	NUOI	D7FHZ6	D8LDR9	Cytochrome b5 heme-binding domain-containing protein.	NUOI homolog, NADH dehydrogenase (Ubiquinone) subunit.	0.722
Esi_0115_0055	Nia	D7FHZ6	D8LQI2	Cytochrome b5 heme-binding domain-containing protein.	NAD(P)H-Nitrate reductase.	0.997
Esi_0179_0015	Esi_0000_0340	D7FNC8	D8LBA4	Enoyl-ACP reductase enoyl-ACP reductase.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.796
Esi_0179_0015	Esi_0043_0063	D7FNC8	D8LN46	Enoyl-ACP reductase enoyl-ACP reductase.	Malonyl-CoA:ACP transacylase.	0.805
Esi_0179_0015	Esi_0115_0055	D7FNC8	D7FHZ6	Enoyl-ACP reductase enoyl-ACP reductase.	Cytochrome b5 heme-binding domain-containing protein.	0.725
Esi_0179_0015	Esi_0309_0028	D7FNC8	D7FWP0	Enoyl-ACP reductase enoyl-ACP reductase.	Beta-hydroxyacyl-ACP dehydratase.	0.716
Esi_0179_0015	Esi_0335_0032	D7FNC8	D7FXY2	Enoyl-ACP reductase enoyl-ACP reductase.	Ketoacyl_synth_N domain-containing protein.	0.714