STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0018_0069Aspartyl protease; Belongs to the peptidase A1 family. (547 aa)    
Predicted Functional Partners:
Cys-2
Cathepsin L-like proteinase; Belongs to the peptidase C1 family.
   
 0.860
Esi_0082_0052
Uncharacterized protein.
    
 0.746
cysteine
Cathepsin-like proteinase; Belongs to the peptidase C1 family.
   
 0.691
Esi_0018_0102
Uncharacterized protein.
   
 0.634
Esi_0006_0052
Ankyrin.
    
 0.631
Esi_0101_0054
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.629
Esi_0002_0039
Uncharacterized protein.
   
 0.629
Esi_0000_0649
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.629
Esi_0006_0095
Carboxypeptidase (Partial); Belongs to the peptidase S10 family.
   
 0.629
Esi_0105_0066
Cathepsin Z-like proteinase; Belongs to the peptidase C1 family.
   
 0.598
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.