STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0018_0131Uncharacterized protein. (665 aa)    
Predicted Functional Partners:
Esi_0226_0021
Uncharacterized protein.
    
 
 0.979
RABLI1
RABLI1, a divergent Ectocarpus-specific RAB-like GTPase.
    
 0.907
Rab7
Rab7, RAB family GTPase.
    
 0.907
Rab7L
Rab7L, RAB family GTPase.
    
 0.907
GDIC1
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.818
Rab8D
Rab8D, RAB family GTPase.
    
 0.779
Rab8B
Rab8B, RAB family GTPase.
    
 0.779
Rab8C
Rab8C, RAB family GTPase.
    
 0.779
Rab8A
Rab8A, RAB family GTPase.
    
 0.779
Rab28
Rab28, Ras superfamily GTPase.
    
 0.779
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.