STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0183_0042SH2 domain containing protein. (1080 aa)    
Predicted Functional Partners:
Esi_0013_0130
IRK_C domain-containing protein.
    
 0.728
Esi_0013_0131
IRK domain-containing protein.
    
 0.728
Esi_0003_0200
Hypothetical leucine rich repeat protein.
   
 0.596
Esi_0034_0144
Hypothetical leucine rich repeat protein.
   
 0.596
Esi_0125_0018
Uncharacterized protein.
    
 0.594
Esi_0212_0026
Uncharacterized protein.
   
 0.583
SDH2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.581
SNR11
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE).
    
 0.567
Esi_0171_0052
Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein.
    
  0.558
Esi_0306_0030
Global transcription factor group.
    
  0.556
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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