STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0188_0020Ubiquitin-conjugating enzyme 1; Belongs to the ubiquitin-conjugating enzyme family. (357 aa)    
Predicted Functional Partners:
Esi_0302_0019
Similar to ubiquitin.
    
 0.913
Esi_0010_0201
Uncharacterized protein.
    
 0.913
Esi_0023_0071
Similar polyubiquitin.
    
 0.913
Esi_0026_0130
Ubiquitin conjugating enzyme.
   
 0.909
Esi_0529_0011
RING-type domain-containing protein.
   
 0.908
Esi_0055_0100
Ubiquitin-like domain-containing protein.
   
 0.908
Esi_0095_0039
Ubiquitin UbiA.
   
 0.908
Esi_0108_0001
Uncharacterized protein.
   
 0.876
Esi_0108_0002
Uncharacterized protein.
   
 0.876
Esi_0357_0001
Uncharacterized protein.
   
 0.876
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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