STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0002_0036FACT complex subunit SPT16. (1037 aa)    
Predicted Functional Partners:
Esi_0022_0161
RNA pol II accessory factor, Cdc73 family protein.
   
 0.996
Esi_0125_0049
Uncharacterized protein.
   
 0.993
Esi_0335_0021
Uncharacterized protein.
    
 0.993
Esi_0107_0021
RPOLD domain-containing protein.
   
 0.989
Esi_0509_0003
Spt4 domain-containing protein.
    
 0.989
Esi_0246_0020
RPOL4c domain-containing protein.
    
 0.985
Esi_0372_0003
Plus3 domain-containing protein.
   
 0.984
Esi_0013_0022
TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.982
Esi_0032_0117
Uncharacterized protein.
    
 0.981
Esi_0046_0105
Uncharacterized protein.
    
  0.981
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.