STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0002_0093Transcriptional activator, putative. (244 aa)    
Predicted Functional Partners:
Esi_0201_0037
Histone-like transcription factor.
  
 0.989
Esi_0201_0038
CBFD_NFYB_HMF domain-containing protein.
  
 0.989
Esi_0349_0022
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.977
Esi_0349_0024
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.977
Esi_0167_0030
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.977
Esi_0010_0029
Histone-like transcription factor family (CBF/NF-Y).
    
 0.958
Esi_0003_0110
Uncharacterized protein.
    
 
 0.790
Esi_0074_0093
Uncharacterized protein.
    
 
 0.790
Esi_0029_0017
Uncharacterized protein.
    
 0.748
Esi_0042_0019
Transcription initiation factor TFIID.
    
 0.748
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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