STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0002_0158Aspartate-semialdehyde dehydrogenase. (348 aa)    
Predicted Functional Partners:
AK1
Aspartokinase; Belongs to the aspartokinase family.
 
 
 0.988
AK
Aspartate kinase/homoserine dehydrogenase.
  
 0.946
ilvH
Acetolactate synthase small subunit.
  
 
 0.903
HSDH
Homoserine dehydrogenase.
  
 0.897
HSDH-2
Homoserine dehydrogenase.
  
 0.897
Esi_0391_0022
Diaminopimelate epimerase.
  
  
 0.879
Esi_0312_0024
Dihydrodipicolinate synthase.
  
  
 0.806
Esi_0154_0047
Hydroxyacyl-Coenzyme A dehydrogenase.
    
 0.793
Esi_0163_0013
Uncharacterized protein.
  
 0.782
Esi_0311_0010
Uncharacterized protein.
  
 0.782
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.