STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0209_0035Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family. (286 aa)    
Predicted Functional Partners:
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
  
 0.986
rps2
30S ribosomal protein S2, chloroplastic.
  
 0.986
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
  
 0.982
Esi_0144_0039
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.979
Esi_0861_0003
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.979
Esi_0002_0192
Uncharacterized protein.
  
 0.978
Esi_0033_0018
Putative ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.978
Esi_0035_0049
40S ribosomal protein S17.
  
 0.978
Esi_0073_0071
KH type-2 domain-containing protein.
  
 0.978
rps17
30S ribosomal protein S17, chloroplastic; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
 0.977
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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