STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0209_0051ATP-binding cassette, sub-family D, member 4. (1229 aa)    
Predicted Functional Partners:
Esi_0051_0115
Uncharacterized protein.
    
 0.860
Esi_0257_0011
Uncharacterized protein.
   
 0.791
Esi_0226_0005
Uncharacterized protein.
    
 0.751
Esi_0053_0055
Pex2_Pex12 domain-containing protein.
   
 
 0.709
Esi_0100_0032
Peroxisomal membrane protein PEX16.
     
 0.698
Esi_0084_0037
TPR_REGION domain-containing protein.
     
 0.668
Esi_0063_0064
Uncharacterized protein.
    
 0.615
Esi_0023_0117
Endoribonuclease L-PSP family protein.
    
 0.615
Rad51A
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
    
   0.598
Esi_0067_0019
Uncharacterized protein; Belongs to the RecA family.
    
   0.598
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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