STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0215_0004Signal peptide peptidase. (625 aa)    
Predicted Functional Partners:
Esi_0079_0076
Uncharacterized protein.
  
 0.879
TPI
Triosephosphate isomerase.
  
 0.851
TPI-2
Triosephosphate isomerase.
  
 0.851
Esi_0138_0072
Uncharacterized protein.
  
 0.786
Esi_0349_0004
Enolase.
  
 0.782
Esi_0000_0454
Uncharacterized protein.
  
 0.782
Esi_0100_0065
Uncharacterized protein.
  
 0.782
Esi_0129_0047
Uncharacterized protein.
  
 0.782
G6PDH
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
  
 0.760
Esi_0163_0013
Uncharacterized protein.
  
 0.749
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.