STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0215_0007M20_dimer domain-containing protein. (489 aa)    
Predicted Functional Partners:
ASS
Argininosuccinate synthetase.
  
 0.851
NAG-PR
N-acetyl-gamma-glutamyl-phosphate reductase, C-terminal part.
  
 0.847
HDH
Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
    
 0.794
Esi_0121_0078
PRA-CH domain-containing protein.
    
 0.794
Esi_0000_0145
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.765
Esi_0391_0022
Diaminopimelate epimerase.
    
 0.720
Esi_0358_0007
Uncharacterized protein.
    
 0.719
Esi_0476_0015
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
    
 0.714
OTC
Ornithine transcarbamoylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.711
GGT
Gamma-glutamyl transpeptidase.
    
 0.696
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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