Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Esi_0006_0056 | Esi_0006_0178 | D8LQE4 | D8LQL0 | WW domain-containing protein. | Carboxylase. | 0.944 |
Esi_0006_0056 | Esi_0038_0129 | D8LQE4 | D8LM14 | WW domain-containing protein. | Carboxylase. | 0.674 |
Esi_0006_0056 | Esi_0091_0014 | D8LQE4 | D7G8N5 | WW domain-containing protein. | Carboxylase. | 0.944 |
Esi_0006_0056 | Esi_0217_0039 | D8LQE4 | D7FRR2 | WW domain-containing protein. | BPL/LPL catalytic domain-containing protein. | 0.774 |
Esi_0006_0056 | PYC | D8LQE4 | D8LCR8 | WW domain-containing protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.674 |
Esi_0006_0056 | rbcL | D8LQE4 | D1J7D6 | WW domain-containing protein. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.944 |
Esi_0006_0178 | Esi_0006_0056 | D8LQL0 | D8LQE4 | Carboxylase. | WW domain-containing protein. | 0.944 |
Esi_0006_0178 | Esi_0008_0217 | D8LQL0 | D7G756 | Carboxylase. | Propionyl-CoA carboxylase, alpha subunit. | 0.994 |
Esi_0006_0178 | Esi_0038_0129 | D8LQL0 | D8LM14 | Carboxylase. | Carboxylase. | 0.738 |
Esi_0006_0178 | Esi_0217_0039 | D8LQL0 | D7FRR2 | Carboxylase. | BPL/LPL catalytic domain-containing protein. | 0.782 |
Esi_0006_0178 | Esi_0292_0036 | D8LQL0 | D8LKC3 | Carboxylase. | Carboxylase. | 0.994 |
Esi_0006_0178 | PYC | D8LQL0 | D8LCR8 | Carboxylase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.968 |
Esi_0008_0217 | Esi_0006_0178 | D7G756 | D8LQL0 | Propionyl-CoA carboxylase, alpha subunit. | Carboxylase. | 0.994 |
Esi_0008_0217 | Esi_0038_0129 | D7G756 | D8LM14 | Propionyl-CoA carboxylase, alpha subunit. | Carboxylase. | 0.966 |
Esi_0008_0217 | Esi_0091_0014 | D7G756 | D7G8N5 | Propionyl-CoA carboxylase, alpha subunit. | Carboxylase. | 0.988 |
Esi_0008_0217 | Esi_0217_0039 | D7G756 | D7FRR2 | Propionyl-CoA carboxylase, alpha subunit. | BPL/LPL catalytic domain-containing protein. | 0.774 |
Esi_0008_0217 | PYC | D7G756 | D8LCR8 | Propionyl-CoA carboxylase, alpha subunit. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.683 |
Esi_0008_0217 | rbcL | D7G756 | D1J7D6 | Propionyl-CoA carboxylase, alpha subunit. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.944 |
Esi_0019_0088 | Esi_0070_0043 | D8LH87 | D8LS60 | Biotin synthase. | Uncharacterized protein. | 0.448 |
Esi_0019_0088 | Esi_0217_0039 | D8LH87 | D7FRR2 | Biotin synthase. | BPL/LPL catalytic domain-containing protein. | 0.832 |
page 1 of 4