STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0217_0039BPL/LPL catalytic domain-containing protein. (301 aa)    
Predicted Functional Partners:
Esi_0019_0088
Biotin synthase.
  
 
 0.832
Esi_0070_0043
Uncharacterized protein.
  
 
 0.832
PYC
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 
 0.798
Esi_0038_0129
Carboxylase.
  
 
 0.798
rbcL
Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
  
 
 0.782
Esi_0091_0014
Carboxylase.
  
 
 0.782
Esi_0006_0178
Carboxylase.
  
 
 0.782
Esi_0008_0217
Propionyl-CoA carboxylase, alpha subunit.
    
 0.774
Esi_0292_0036
Carboxylase.
    
 0.774
Esi_0006_0056
WW domain-containing protein.
    
 0.774
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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