STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP4Putative: flagellar radial spoke protein 4. (438 aa)    
Predicted Functional Partners:
Esi_0073_0086
RanBD1 domain-containing protein.
   
 
 0.924
RAN
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.910
Esi_0045_0029
Uncharacterized protein.
  
 
 0.754
Esi_0136_0047
Uncharacterized protein.
    
 0.732
Esi_0320_0024
Peptidase S59 domain-containing protein.
    
 0.732
Esi_0337_0012
Uncharacterized protein.
    
 0.732
Esi_0058_0117
MORN repeat-containing protein.
    
 
 0.714
Esi_0008_0117
Uncharacterized protein.
    
 
 0.714
Esi_0103_0013
Uncharacterized protein.
    
 
 0.714
Esi_0094_0092
Uncharacterized protein.
  
 
 0.699
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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