STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0228_0041Uncharacterized protein. (435 aa)    
Predicted Functional Partners:
FPPS
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.695
Esi_0264_0024
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
  0.695
Esi_0004_0180
Di-trans-poly-cis-decaprenylcistransferase.
    
  0.616
Esi_0004_0181
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.616
Esi_0074_0092
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.616
SPPS
Solanesyl diphosphate synthase-like protein; Belongs to the FPP/GGPP synthase family.
    
  0.604
GGPPS1
Geranylgeranyl pyrophosphate synthetase, chloroplast.
    
  0.604
GGPPS1-2
Geranylgeranyl pyrophosphate synthase, chloroplast; Belongs to the FPP/GGPP synthase family.
    
  0.604
GPPS
Geranyl-diphosphate synthase.
    
  0.604
Esi_0175_0052
Peptidase; Belongs to the peptidase M24B family.
  
 
  0.408
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.