STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDPK-4N/a. (685 aa)    
Predicted Functional Partners:
Esi_0128_0034
Serine/threonine-protein phosphatase.
    
 0.618
Esi_0128_0072
Serine/threonine-protein phosphatase.
    
 0.618
Esi_0128_0073
Serine/threonine-protein phosphatase.
    
 0.618
Esi_0121_0057
ATP binding protein.
  
 
  0.593
PK-72
Serine/threonine-protein kinase CTR1.
  
 
  0.592
PK-12
CTR-like PK.
  
 
  0.591
Esi_0209_0038
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.590
PK-53
Serine/threonine-protein kinase CTR1.
  
 
  0.582
MAPK-4
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
 
  0.578
PK-70
Serine/threonine-protein kinase CTR1.
  
 
  0.573
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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