STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0243_0027THUMP domain-containing protein. (695 aa)    
Predicted Functional Partners:
Esi_0004_0180
Di-trans-poly-cis-decaprenylcistransferase.
   
    0.548
Esi_0004_0181
Alkyl transferase; Belongs to the UPP synthase family.
   
    0.548
Esi_0074_0092
Alkyl transferase; Belongs to the UPP synthase family.
   
    0.548
GLURS
Glutamyl-tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.546
Esi_0195_0022
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
    0.532
Esi_0752_0001
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
    0.532
Esi_0084_0063
TTC5_OB domain-containing protein.
  
    0.532
Esi_0144_0077
Uncharacterized protein.
  
    0.520
Esi_0189_0001
Chromosome 20 open reading frame 3.
  
    0.520
Esi_0194_0013
Polyribonucleotide nucleotidyltransferase.
  
    0.520
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.