STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0274_0019Proline--tRNA ligase, central part. (492 aa)    
Predicted Functional Partners:
Esi_0142_0038
Similar to Tyrosyl-tRNA synthetase, cytoplasmic (Tyrosyl--tRNA ligase) (TyrRS).
  
 0.997
GLURS
Glutamyl-tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.991
GLNRS
Glutaminyl-tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.990
ILERS
Isoleucyl-tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.952
ILERS-2
Isoleucyl-tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.920
LEURS
Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.912
GTS
Glutamyl-tRNA Synthetase, chloroplast; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.908
Esi_0171_0049
Endothelial monocyte-activating polypeptide II pro-EMAP II family protein.
  
 0.895
ARGRS
Arginyl-tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.884
ARGRS-2
Arginyl-tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.884
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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