STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0287_0007Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (844 aa)    
Predicted Functional Partners:
Esi_0122_0104
POT1 protection of telomeres 1 homolog.
    
 0.643
Esi_0292_0018
Nibrin.
    
  0.601
MRE11
Meiotic recombination 11.
    
  0.550
Esi_0195_0008
CSD domain-containing protein.
    
 0.534
Esi_0175_0013
Methyltransferase.
     
 0.514
PPMT
Magnesium-protoporphyrin IX methyltransferase, putative chloroplast.
     
 0.514
Esi_0041_0012
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
     
 0.514
Esi_0007_0115
Methyltransferase type 12.
     
 0.514
Esi_0203_0057
Uncharacterized protein.
    
 0.501
Esi_0465_0002
AAA_23 domain-containing protein.
    
 0.501
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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