STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0029_0049PCI domain-containing protein. (549 aa)    
Predicted Functional Partners:
Esi_0264_0023
Uncharacterized protein.
    
 
 0.930
Esi_0087_0054
PCI domain-containing protein.
   
 
 0.924
Esi_0029_0142
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 
 0.837
Esi_0199_0017
PCI domain-containing protein.
   
 
 0.814
Esi_0058_0008
PCI domain-containing protein.
   
 
 0.814
Centrin
N/a.
    
 
 0.592
Esi_0047_0059
Centrin-1, putative.
    
 
 0.592
CMS
4-diphosphocytidyl-2C-methyl-D-erythritol synthase, chloroplast.
    
 
 0.592
Centrin-2
Centrin.
    
 
 0.592
Esi_0028_0053
Putative: similar to centrin.
    
 
 0.592
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.