STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0029_0096Hypothetical leucine rich repeat protein. (2322 aa)    
Predicted Functional Partners:
Esi_0046_0039
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.794
Esi_0049_0101
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.794
Esi_0079_0055
RING-type domain-containing protein.
    
 0.714
Esi_0079_0058
RING-type domain-containing protein.
    
 0.714
Esi_0180_0032
RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C; Belongs to the SKP1 family.
    
 0.700
CRY1
Cryptochrome 1.
    
 0.686
CRY2
Cryptochrome 2.
    
 0.686
CRY3
Cryptochrome 3.
    
 0.686
PHR1
Photolyase 1.
    
 0.686
Esi_0006_0151
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.686
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.