STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0295_0021Cnd3 domain-containing protein. (1200 aa)    
Predicted Functional Partners:
Esi_0114_0045
Uncharacterized protein.
   
 0.999
Esi_0038_0158
Uncharacterized protein.
   
 0.999
Esi_0101_0095
SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2).
   
 0.995
Esi_0002_0285
SMC_N domain-containing protein.
   
 0.995
Esi_0002_0287
Smc4.
   
 0.990
Esi_0008_0141
Uncharacterized protein.
   
 0.990
Esi_0056_0090
Structural maintenance of chromosomes protein.
   
 0.990
Esi_0069_0081
Structural maintenance of chromosomes protein.
   
 0.899
Esi_0014_0059
Structural maintenance of chromosomes protein.
   
 0.897
Esi_0279_0040
AAA_23 domain-containing protein.
   
 0.864
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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