STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0003_0052Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (105 aa)    
Predicted Functional Partners:
Esi_0107_0021
RPOLD domain-containing protein.
   
 
 0.950
Esi_0246_0020
RPOL4c domain-containing protein.
   
   0.945
Esi_0552_0011
RNA polymerase II core subunit.
   
   0.945
Esi_0046_0105
Uncharacterized protein.
  
   0.943
Esi_0294_0026
Uncharacterized protein.
   
   0.939
Esi_0032_0117
Uncharacterized protein.
    
   0.938
Esi_0509_0003
Spt4 domain-containing protein.
   
 
 0.938
Esi_0384_0016
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
   0.938
Esi_0117_0017
Transcription elongation factor SPT5.
    
 
 0.922
Esi_0010_0190
Putative copper transporter.
    
 
 0.922
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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