STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0003_0218Uncharacterized protein. (77 aa)    
Predicted Functional Partners:
Sam50
Sorting and Assembly Machinery 50kDa protein (N-terminal).
   
 0.802
Esi_0049_0123
Heat shock protein 40 like protein/ DnaJ domain containing protein.
    
 0.577
QCR-5
Ubiquinol cytochrome c reductase subunit QCR7.
   
  
 0.541
NDA
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
    0.474
Esi_0312_0023
zf-CHCC domain-containing protein.
   
   0.471
Esi_0132_0053
ADF-H domain-containing protein.
     
 0.470
Esi_0076_0069
Actin binding protein.
     
 0.470
SDH2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
  
 0.466
Sam35
Sorting and Assembly Machinery 35kDa protein.
   
 0.457
Tom40
Mitochondrial TOM complex subunit, Tom40 homolog.
    
 0.429
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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