STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0302_0002Uncharacterized protein. (1277 aa)    
Predicted Functional Partners:
Esi_0186_0006
Similar to neutral Sphingomyelinase, putative.
     
 0.641
Esi_0134_0072
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
  0.585
RAC
RAC, RHO family GTPase.
   
 0.526
Esi_0005_0207
FYVE-type domain-containing protein.
   
 
  0.517
RME1L1
RME1L1, RME1-like GTPase/ATPase without a C-terminal EH domain; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.512
RME1L3
RME1L3, RME1-like GTPase/ATPase without a C-terminal EH domain; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.512
RME1L4
RME1L4, RME1-like GTPase/ATPase without a C-terminal EH domain.
     
 0.512
RME1
RME1, RME-1/EHD family ATPase with a C-terminal EH domain; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.512
RME1L2
RME1L2, RME1-like GTPase/ATPase without a C-terminal EH domain; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.512
Esi_0076_0045
Uncharacterized protein.
     
 0.512
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.